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5 changed files with 53 additions and 49 deletions

36
app.R
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@@ -55,7 +55,7 @@ ui <- page_sidebar(
actionButton("clean_data_button", "Главная страница", icon("house", lib = "font-awesome")),
actionButton("load_data_button", "Загрузить данные", icon("pencil", lib = "font-awesome")),
downloadButton("downloadDocx", "get .docx (test only)"),
textOutput("status_message"),
uiOutput("status_message"),
textOutput("status_message2"),
uiOutput("display_log"),
position = "left",
@@ -650,12 +650,16 @@ server <- function(input, output, session) {
# STATUSES ===============================
# вывести отображение что что-то не так
output$status_message <- renderText({
scheme()
output$status_message <- renderUI({
shiny::validate(
need(values$main_key, "⚠️ Необходимо указать id пациента!")
)
paste0("ID: ", values$main_key)
span(
strong("Таблица: "), names(enabled_schemas)[enabled_schemas == scheme()],
br(),
strong("ID: "), values$main_key
)
})
output$status_message2 <- renderText({
@@ -806,8 +810,8 @@ server <- function(input, output, session) {
ui_load_menu,
title = "Загрузить имеющиеся данные",
footer = tagList(
actionButton("close_modal_button", "Отмена", class = "btn btn-danger"),
actionButton("load_data", "Загрузить данные"),
actionButton("close_modal_button", "Отмена", class = "btn-danger"),
),
easyClose = TRUE
)
@@ -1005,8 +1009,8 @@ server <- function(input, output, session) {
),
checkboxInput("upload_data_from_xlsx_owerwrite_all_data", "перезаписать все данные", width = 450),
footer = tagList(
modalButton("Отмена"),
actionButton("button_upload_data_from_xlsx_confirm", "Добавить")
actionButton("button_upload_data_from_xlsx_confirm", "Добавить"),
actionButton("close_modal_button", "Отмена", class = "btn-danger")
),
easyClose = FALSE
))
@@ -1034,19 +1038,17 @@ server <- function(input, output, session) {
for (table_name in mhcs()$all_tables_names) {
df <- openxlsx2::read_xlsx(wb, table_name)
scheme <- mhcs()$get_schema(table_name) |>
filter(!form_type %in% c("description", "nested_forms"))
scheme <- mhcs()$get_schema_with_values_forms(table_name)
# столбцы в таблицы и схема
df_to_schema_compare <- setdiff(colnames(df), unique(scheme$form_id))
schema_to_df_compare <- setdiff(unique(scheme$form_id), colnames(df))
if (length(schema_to_df_compare) > 0 ) {
if (length(df_to_schema_compare) > 0 ) {
cli::cli_warn(c("в схеме для '{table_name}' нет следующих столбцов:", paste("- ", df_to_schema_compare)))
}
# схема и столбцы в таблице
schema_to_df_compare <- setdiff(unique(scheme$form_id), colnames(df))
if (length(schema_to_df_compare) > 0 ) {
message <- glue::glue("столбцы в таблице '{table_name}' не соответсвуют схеме")
@@ -1061,8 +1063,7 @@ server <- function(input, output, session) {
for (table_name in mhcs()$all_tables_names) {
df <- openxlsx2::read_xlsx(wb, table_name)
scheme <- mhcs()$get_schema(table_name) |>
filter(!form_type %in% c("description", "nested_forms"))
scheme <- mhcs()$get_schema_with_values_forms(table_name)
date_columns <- subset(scheme, form_type == "date", form_id, drop = TRUE)
number_columns <- subset(scheme, form_type == "number", form_id, drop = TRUE)
@@ -1091,8 +1092,13 @@ server <- function(input, output, session) {
df_original <- DBI::dbReadTable(con, table_name) |>
as_tibble()
if (input$upload_data_from_xlsx_owerwrite_all_data == TRUE) cli::cli_abort("not implemented yet")
if (input$upload_data_from_xlsx_owerwrite_all_data == TRUE) {
DBI::dbRemoveTable(con, table_name)
} else {
# удаление данных в базе данных по ключам
walk(
.x = unique(df[[main_key_id]]),
.f = \(main_key) {
@@ -1103,6 +1109,8 @@ server <- function(input, output, session) {
}
)
}
DBI::dbWriteTable(
con,
name = table_name,

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@@ -39,7 +39,7 @@ check_if_table_is_exist_and_init_if_not = function(
if (table_name %in% DBI::dbListTables(con)) {
cli::cli_inform(c("*" = "таблица есть такая: '{table_name}'"))
cli::cli_inform(c("*" = "проверка таблицы в базе данных: '{table_name}'"))
# если таблица существует, производим проверку структуры таблицы
compare_existing_table_with_schema(

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@@ -29,6 +29,10 @@ check_and_init_scheme = function() {
cli::cli_inform(c("*" = "проверка схемы..."))
files_to_watch <- c(
"modules/scheme_generator.R"
)
scheme_names <- enabled_schemas
scheme_file <- paste0("configs/schemas/", scheme_names, ".xlsx")
scheme_file <- stats::setNames(scheme_file, scheme_names)
@@ -40,7 +44,7 @@ check_and_init_scheme = function() {
hash_file <- "temp/schema_hash.rds"
#
exist_hash <- tools::md5sum(scheme_file)
exist_hash <- tools::md5sum(c(scheme_file, files_to_watch))
# если первый запуск (нет файла с кешем) инициализация схемы
if (!file.exists(hash_file) | !file.exists("scheme.rds") | !all(file.exists(db_files))) {

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@@ -36,7 +36,7 @@ scheme_R6 <- R6::R6Class(
private$main_key_id <- self$get_key_id("main")
box::use(modules/utils)
private$testest <- bslib::navset_card_underline(
private$bslib_rendered_ui <- bslib::navset_card_underline(
id = "main",
!!!utils$make_list_of_pages(private$schemes_list[["main"]], private$main_key_id),
header = NULL,
@@ -47,7 +47,7 @@ scheme_R6 <- R6::R6Class(
get_all_ids = function(table_name) {
private$schemes_list[[table_name]] |>
dplyr::filter(!form_type %in% private$exluded_types) |>
dplyr::filter(!form_type %in% private$excluded_types) |>
dplyr::distinct(form_id) |>
dplyr::pull(form_id)
@@ -65,32 +65,24 @@ scheme_R6 <- R6::R6Class(
},
extract_forms_id_and_types_from_scheme2 = function(scheme) {
form_id_and_types_list <- scheme |>
dplyr::filter(!form_type %in% private$exluded_types) |>
dplyr::distinct(form_id, form_type) |>
tibble::deframe()
list(
key = form_id_and_types_list[1],
form = form_id_and_types_list[-1]
)
},
# get_key_id = function(table_name) {
# self$extract_forms_id_and_types_from_scheme2(private$schemes_list[[table_name]])
# },
# возврат схемы ------------------------------------
## полностью -------
get_schema = function(table_name) {
private$schemes_list[[table_name]]
},
## с полями имеющие значение -------
get_schema_with_values_forms = function(table_name) {
private$schemes_list[[table_name]] |>
dplyr::filter(!form_type %in% private$excluded_types)
},
get_id_type_list = function(table_name) {
# wo main key
this_key_id <- self$get_key_id(table_name)
private$schemes_list[[table_name]] |>
dplyr::filter(!form_type %in% private$exluded_types) |>
dplyr::filter(!form_type %in% private$excluded_types) |>
dplyr::filter(form_id != {{this_key_id}}) |>
dplyr::distinct(form_id, form_type) |>
tibble::deframe()
@@ -107,7 +99,7 @@ scheme_R6 <- R6::R6Class(
private$nested_forms_names
},
get_main_form_ui = function() {
private$testest
private$bslib_rendered_ui
}
),
private = list(
@@ -115,8 +107,8 @@ scheme_R6 <- R6::R6Class(
schemes_list = NULL,
main_key_id = NA,
nested_forms_names = NA,
testest = NA,
exluded_types = c("inline_table", "nested_forms","description", "description_header"),
bslib_rendered_ui = NA,
excluded_types = c("nested_forms", "description", "description_header"),
load_scheme_from_xlsx = function(sheet_name) {

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@@ -1,6 +1,6 @@
#' @export
make_list_of_pages = function(main_schema, main_key_id) {
cli::cli_alert_success("AAAA")
purrr::map(
.x = unique(main_schema$part),
.f = \(page_name) {