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| Author | SHA1 | Date | |
|---|---|---|---|
| c50a259541 | |||
| 6cf76641ed | |||
| 5a021b7e8f | |||
| 3f396dedb4 | |||
| c72cf5b815 | |||
| 0212726b06 | |||
| 2f62a94afa | |||
| 4c3d339361 | |||
| 5a6dba25ee | |||
| 5dfe7328b6 |
20
.Rprofile
20
.Rprofile
@@ -1 +1,21 @@
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source("renv/activate.R")
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(function() {
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paths <- c(
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"FORM_AUTH_ENABLED",
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"FORM_VERSION",
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"FORM_TITLE"
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)
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lines <- paths[Sys.getenv(paths) == ""]
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if (length(lines) > 0) {
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cli::cli_h3("Настройка путей окружения")
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cli::cli_code(paste0(lines, "="))
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cli::cli_inform(c(
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"i" = "Для нормальной работы скриптов добавьте в {.file .Renviron}:"
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))
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}
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})()
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154
app.R
154
app.R
@@ -11,8 +11,6 @@ suppressPackageStartupMessages({
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# КАК ЗАПРЯТЯАТЬ ID
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source("helpers/functions.R")
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# SOURCE FILES ============================
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box::purge_cache()
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box::use(
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@@ -55,7 +53,7 @@ ui <- page_sidebar(
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actionButton("clean_data_button", "Главная страница", icon("house", lib = "font-awesome")),
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actionButton("load_data_button", "Загрузить данные", icon("pencil", lib = "font-awesome")),
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downloadButton("downloadDocx", "get .docx (test only)"),
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textOutput("status_message"),
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uiOutput("status_message"),
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textOutput("status_message2"),
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uiOutput("display_log"),
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position = "left",
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@@ -120,9 +118,9 @@ server <- function(input, output, session) {
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if (AUTH_ENABLED) {
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reactiveValuesToList(res_auth)
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if (res_auth$admin) {
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print("admin")
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# print("admin")
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} else {
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print("not_admin")
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# print("not_admin")
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showing_buttons <- FALSE
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}
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}
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@@ -178,7 +176,7 @@ server <- function(input, output, session) {
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} else {
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# list of rendered panels
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validator_main(data_validation$init_val(mhcs()$get_schema("main")))
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validator_main(data_validation$init_val(mhcs()$get_scheme("main")))
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validator_main()$enable()
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mhcs()$get_main_form_ui
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}
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@@ -206,8 +204,8 @@ server <- function(input, output, session) {
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if (missing(ns)) ns <- NULL
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# transform df to list
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loaded_df_for_id <- as.list(df)
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loaded_df_for_id <- df[input_ids]
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# loaded_df_for_id <- as.list(df)
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# loaded_df_for_id <- df[input_ids]
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# rewrite input forms
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purrr::walk2(
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@@ -220,7 +218,7 @@ server <- function(input, output, session) {
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form_id = x_id,
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form_type = x_type,
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value = df[[x_id]],
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scheme = mhcs()$get_schema(table_name),
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scheme = mhcs()$get_scheme(table_name),
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ns = ns
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)
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}
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@@ -236,8 +234,8 @@ server <- function(input, output, session) {
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) {
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nested_key_id <- mhcs()$get_key_id(table_name)
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input_types <- unname(id_and_types_list)
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input_ids <- names(id_and_types_list)
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input_types <- unname(id_and_types_list)
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input_ids <- names(id_and_types_list)
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if (missing(ns)) ns <- NULL
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@@ -282,7 +280,7 @@ server <- function(input, output, session) {
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exported_df <- exported_df |>
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mutate(
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!!dplyr::sym(mhcs()$get_main_key_id) := values$main_key,
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!!dplyr::sym(nested_key_id) := values$nested_key,
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!!dplyr::sym(nested_key_id) := values$nested_key,
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.before = 1
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)
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}
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@@ -294,7 +292,7 @@ server <- function(input, output, session) {
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df = exported_df,
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table_name = table_name,
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schm = mhcs(),
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main_key_value = values$main_key,
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main_key_value = values$main_key,
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nested_key_value = values$nested_key,
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con = con
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)
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@@ -337,11 +335,11 @@ server <- function(input, output, session) {
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## функция отображения вложенной формы для выбранной таблицы --------
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show_modal_for_nested_form <- function(con) {
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ns <- NS(values$nested_form_id)
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ns <- NS(values$nested_form_id)
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key_id <- mhcs()$get_key_id(values$nested_form_id)
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# загрузка схемы для данной вложенной формы
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this_nested_form_scheme <- mhcs()$get_schema(values$nested_form_id)
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this_nested_form_scheme <- mhcs()$get_scheme(values$nested_form_id)
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# мини-схема для ключа
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this_nested_form_key_scheme <- subset(this_nested_form_scheme, form_id == key_id)
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@@ -362,8 +360,8 @@ server <- function(input, output, session) {
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}
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# nested ui
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if (!is.null(values$nested_key)) {
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yay_its_fun <- purrr::map(
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nested_form_panels <- if (!is.null(values$nested_key)) {
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purrr::map(
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.x = unique(this_nested_form_scheme$subgroup),
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.f = \(subgroup) {
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@@ -383,9 +381,8 @@ server <- function(input, output, session) {
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}
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)
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} else {
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yay_its_fun <- list(bslib::nav_panel("", "empty"))
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list(bslib::nav_panel("", div("Нет доступных записей.", br(), "Необходимо создать новую запись.")))
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}
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# yay_its_fun <- !!!yay_its_fun
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# ui для всплывающего окна
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ui_for_inline_table <- navset_card_underline(
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@@ -393,19 +390,18 @@ server <- function(input, output, session) {
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width = 300,
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selectizeInput(
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inputId = "nested_key_selector",
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label = this_nested_form_key_scheme$form_label,
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label = strong(this_nested_form_key_scheme$form_label),
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choices = kyes_for_this_table,
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selected = values$nested_key,
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# options = list(placeholder = "действие комиссии", create = FALSE, onInitialize = I('function() { this.setValue(""); }'))
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),
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actionButton("add_new_nested_key_button", "add"),
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actionButton("nested_form_save_button", "save"),
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actionButton("nested_form_dt_button", "dt"),
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actionButton("add_new_nested_key_button", "Добавить новую запись", icon("plus", lib = "font-awesome")),
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actionButton("nested_form_save_button", "Сохранить данные", icon("floppy-disk", lib = "font-awesome")),
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actionButton("nested_form_dt_button", "DT", icon("table", lib = "font-awesome")),
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uiOutput("validation_nested"),
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open = list(mobile = "always-above")
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),
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# if (!is.null(values$nested_key)) {rlang::syms(!!!yay_its_fun)} else bslib::nav_panel("empty")
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!!!yay_its_fun
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!!!nested_form_panels
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)
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# проверка данных для внутренних таблиц
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@@ -433,15 +429,17 @@ server <- function(input, output, session) {
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con = con
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)
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col_types <- mhcs()$get_schema(values$nested_form_id) |>
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col_types <- mhcs()$get_scheme_with_values_forms(values$nested_form_id) |>
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dplyr::distinct(form_id, form_type, form_label)
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date_cols <- subset(col_types, form_type == "date", form_id, drop = TRUE)
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date_cols <- which(col_types$form_type == "date")
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str_cols <- which(col_types$form_type != "date")
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values$data <- values$data |>
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select(-mhcs()$get_main_key_id) |>
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mutate(
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dplyr::across(tidyselect::all_of({{date_cols}}), as.Date)
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dplyr::across(tidyselect::all_of({{date_cols}}), as.Date),
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dplyr::across(tidyselect::all_of({{str_cols}}), as.character),
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) |>
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arrange({{key_id}})
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@@ -450,7 +448,7 @@ server <- function(input, output, session) {
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values$data,
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caption = 'Table 1: This is a simple caption for the table.',
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rownames = FALSE,
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# colnames = dplyr::pull(col_types, form_id, form_label),
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colnames = col_types |> dplyr::pull(form_id, form_label),
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extensions = c('KeyTable', "FixedColumns"),
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editable = 'cell',
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selection = "none",
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@@ -461,7 +459,8 @@ server <- function(input, output, session) {
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keys = TRUE
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)
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) |>
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DT::formatDate(date_cols, "toLocaleDateString", params = list('ru-RU'))
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DT::formatDate(date_cols, "toLocaleDateString", params = list('ru-RU')) |>
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DT::formatString(str_cols)
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)
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showModal(modalDialog(
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@@ -599,7 +598,7 @@ server <- function(input, output, session) {
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removeModal()
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# та самая форма для ключа
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scheme_for_key_input <- mhcs()$get_schema(values$nested_form_id) |>
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scheme_for_key_input <- mhcs()$get_scheme(values$nested_form_id) |>
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dplyr::filter(form_id == mhcs()$get_key_id(values$nested_form_id))
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ui1 <- rlang::exec(
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@@ -650,12 +649,16 @@ server <- function(input, output, session) {
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# STATUSES ===============================
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# вывести отображение что что-то не так
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output$status_message <- renderText({
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scheme()
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output$status_message <- renderUI({
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shiny::validate(
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need(values$main_key, "⚠️ Необходимо указать id пациента!")
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)
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paste0("ID: ", values$main_key)
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span(
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strong("Таблица: "), names(enabled_schemas)[enabled_schemas == scheme()],
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br(),
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strong("ID: "), values$main_key
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)
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})
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output$status_message2 <- renderText({
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@@ -675,7 +678,7 @@ server <- function(input, output, session) {
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observeEvent(input$add_new_main_key_button, {
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# данные для главного ключа
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scheme_for_key_input <- mhcs()$get_schema("main") |>
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scheme_for_key_input <- mhcs()$get_scheme("main") |>
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dplyr::filter(form_id == mhcs()$get_main_key_id)
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# создать форму для выбора ключа
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@@ -806,8 +809,8 @@ server <- function(input, output, session) {
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ui_load_menu,
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title = "Загрузить имеющиеся данные",
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footer = tagList(
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actionButton("close_modal_button", "Отмена", class = "btn btn-danger"),
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actionButton("load_data", "Загрузить данные"),
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actionButton("close_modal_button", "Отмена", class = "btn-danger"),
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),
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easyClose = TRUE
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)
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@@ -861,10 +864,11 @@ server <- function(input, output, session) {
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tibble::as_tibble()
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# handle with data
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scheme <- mhcs()$get_schema(x)
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scheme <- mhcs()$get_scheme(x)
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date_columns <- subset(scheme, form_type == "date", form_id, drop = TRUE)
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number_columns <- subset(scheme, form_type == "number", form_id, drop = TRUE)
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other_cols <- which(colnames(df) %in% c(date_columns, number_columns))
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df <- df |>
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dplyr::mutate(
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@@ -872,12 +876,24 @@ server <- function(input, output, session) {
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dplyr::across(tidyselect::all_of({{date_columns}}), as.Date),
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# числа - к единому формату десятичных значений
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dplyr::across(tidyselect::all_of({{number_columns}}), ~ gsub("\\.", "," , .x)),
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)
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dplyr::across(tidyselect::all_of({{other_cols}}), as.character)
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) |>
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# очистка от пустых ключей
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dplyr::filter(!is.na(mhcs()$get_main_key_id))
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df
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}
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)
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# добавить мета информацию
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list_of_df[["meta"]] <- dplyr::tribble(
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~`Параметр` , ~`Значение`,
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"Пользователь" , ifelse(AUTH_ENABLED, res_auth$user, "anonymous"),
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"Название базы" , names(enabled_schemas)[enabled_schemas == scheme()],
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"id базы" , scheme(),
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"Время выгрузки" , format(Sys.time(), "%d.%m.%Y %H:%M:%S"),
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)
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# set date params
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options("openxlsx2.dateFormat" = "dd.mm.yyyy")
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@@ -911,10 +927,11 @@ server <- function(input, output, session) {
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"---",
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"\n"
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)
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box::use(modules/data_manipulations[is_this_empty_value])
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# iterate by scheme parts
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purrr::walk(
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.x = unique(mhcs()$get_schema("main")$part),
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.x = unique(mhcs()$get_scheme("main")$part),
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.f = \(x_iter1) {
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# write level 1 header
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HEADER_1 <- paste("#", x_iter1, "\n")
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@@ -922,14 +939,14 @@ server <- function(input, output, session) {
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# iterate by level2 headers (subgroups)
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purrr::walk(
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.x = dplyr::pull(unique(subset(mhcs()$get_schema("main"), part == x_iter1, "subgroup"))),
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.x = dplyr::pull(unique(subset(mhcs()$get_scheme("main"), part == x_iter1, "subgroup"))),
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.f = \(x_iter2) {
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# get header 2 name
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HEADER_2 <- paste("##", x_iter2, "\n")
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# for some reason set litle scheme...
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litle_scheme <- subset(
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x = mhcs()$get_schema("main"),
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x = mhcs()$get_scheme("main"),
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subset = part == x_iter1 & subgroup == x_iter2,
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select = c("form_id", "form_label", "form_type")
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) |>
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@@ -950,7 +967,7 @@ server <- function(input, output, session) {
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if (length(docx_value) > 1) docx_value <- paste(docx_value, collapse = ", ")
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# if non empty data - add string
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if (!check_for_empty_data(docx_value)) paste0("**", docx_label, "**: ", docx_value, "\n") else NA
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if (!is_this_empty_value(docx_value)) paste0("**", docx_label, "**: ", docx_value, "\n") else NA
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} else if (docx_type == "description") {
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# treat description label as citation text
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paste0(">", docx_label, "\n")
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@@ -1005,8 +1022,8 @@ server <- function(input, output, session) {
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),
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checkboxInput("upload_data_from_xlsx_owerwrite_all_data", "перезаписать все данные", width = 450),
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footer = tagList(
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modalButton("Отмена"),
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actionButton("button_upload_data_from_xlsx_confirm", "Добавить")
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actionButton("button_upload_data_from_xlsx_confirm", "Добавить"),
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actionButton("close_modal_button", "Отмена", class = "btn-danger")
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),
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easyClose = FALSE
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))
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@@ -1034,24 +1051,23 @@ server <- function(input, output, session) {
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for (table_name in mhcs()$all_tables_names) {
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df <- openxlsx2::read_xlsx(wb, table_name)
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scheme <- mhcs()$get_schema(table_name) |>
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filter(!form_type %in% c("description", "nested_forms"))
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scheme <- mhcs()$get_scheme_with_values_forms(table_name)
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# столбцы в таблицы и схема
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df_to_schema_compare <- setdiff(colnames(df), unique(scheme$form_id))
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df_to_schema_compare <- df_to_schema_compare[df_to_schema_compare != main_key_id]
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schema_to_df_compare <- setdiff(unique(scheme$form_id), colnames(df))
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if (length(schema_to_df_compare) > 0 ) {
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if (length(df_to_schema_compare) > 0 ) {
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cli::cli_warn(c("в схеме для '{table_name}' нет следующих столбцов:", paste("- ", df_to_schema_compare)))
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}
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# схема и столбцы в таблице
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schema_to_df_compare <- setdiff(unique(scheme$form_id), colnames(df))
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if (length(schema_to_df_compare) > 0 ) {
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message <- glue::glue("столбцы в таблице '{table_name}' не соответсвуют схеме")
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cli::cli_warn(c(message, paste("- ", schema_to_df_compare)))
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showNotification(message, type = "error")
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cli::cli_warn(c(message, paste("- ", schema_to_df_compare)))
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return()
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}
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@@ -1061,11 +1077,11 @@ server <- function(input, output, session) {
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for (table_name in mhcs()$all_tables_names) {
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df <- openxlsx2::read_xlsx(wb, table_name)
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scheme <- mhcs()$get_schema(table_name) |>
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filter(!form_type %in% c("description", "nested_forms"))
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scheme <- mhcs()$get_scheme_with_values_forms(table_name)
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date_columns <- subset(scheme, form_type == "date", form_id, drop = TRUE)
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date_columns <- subset(scheme, form_type == "date", form_id, drop = TRUE)
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number_columns <- subset(scheme, form_type == "number", form_id, drop = TRUE)
|
||||
other_cols <- which(colnames(df) %in% c(date_columns, number_columns))
|
||||
|
||||
# функция для преобразование числовых значений и сохранения "NA"
|
||||
num_converter <- function(old_col) {
|
||||
@@ -1083,25 +1099,37 @@ server <- function(input, output, session) {
|
||||
df <- df |>
|
||||
dplyr::mutate(
|
||||
# даты - к единому формату
|
||||
dplyr::across(tidyselect::all_of({{date_columns}}), \(x) purrr::map_chr(x, db$excel_to_db_dates_converter)),
|
||||
dplyr::across(tidyselect::all_of({{date_columns}}), \(x) purrr::map_chr(x, db$excel_to_db_dates_converter)),
|
||||
dplyr::across(tidyselect::all_of({{number_columns}}), num_converter),
|
||||
dplyr::across(tidyselect::all_of({{other_cols}}), as.character)
|
||||
) |>
|
||||
select(all_of(unique(c(main_key_id, scheme$form_id))))
|
||||
|
||||
df_original <- DBI::dbReadTable(con, table_name) |>
|
||||
as_tibble()
|
||||
|
||||
if (input$upload_data_from_xlsx_owerwrite_all_data == TRUE) cli::cli_abort("not implemented yet")
|
||||
if (input$upload_data_from_xlsx_owerwrite_all_data == TRUE) {
|
||||
|
||||
walk(
|
||||
.x = unique(df[[main_key_id]]),
|
||||
.f = \(main_key) {
|
||||
DBI::dbRemoveTable(con, table_name)
|
||||
|
||||
if (main_key %in% unique(df_original[[main_key_id]])) {
|
||||
DBI::dbExecute(con, glue::glue("DELETE FROM {table_name} WHERE {main_key_id} = '{main_key}'"))
|
||||
} else {
|
||||
|
||||
# удаление данных в базе данных по ключам
|
||||
walk(
|
||||
.x = unique(df[[main_key_id]]),
|
||||
.f = \(main_key) {
|
||||
|
||||
if (main_key %in% unique(df_original[[main_key_id]])) {
|
||||
DBI::dbExecute(con, glue::glue("DELETE FROM {table_name} WHERE {main_key_id} = '{main_key}'"))
|
||||
}
|
||||
}
|
||||
}
|
||||
)
|
||||
)
|
||||
|
||||
}
|
||||
|
||||
# очистка от пустых ключей
|
||||
df <- df |>
|
||||
dplyr::filter(!is.na({{main_key_id}}))
|
||||
|
||||
DBI::dbWriteTable(
|
||||
con,
|
||||
@@ -1110,7 +1138,7 @@ server <- function(input, output, session) {
|
||||
append = TRUE
|
||||
)
|
||||
|
||||
message <- glue::glue("Данные таблицы '{table_name}' успешно обновлены")
|
||||
message <- glue::glue("Данные таблицы '{table_name}' успешно обновлены (добавлено {nrow(df)} записей)")
|
||||
showNotification(
|
||||
message,
|
||||
type = "message"
|
||||
@@ -1226,4 +1254,4 @@ server <- function(input, output, session) {
|
||||
|
||||
app <- shinyApp(ui = ui, server = server)
|
||||
|
||||
runApp(app, launch.browser = TRUE)
|
||||
runApp(app, launch.browser = TRUE)
|
||||
Binary file not shown.
@@ -1,27 +0,0 @@
|
||||
|
||||
|
||||
#' @description Function check if variable contains some sort of empty data
|
||||
#' (NULL, NA, "", other 0-length data) and return `TRUE` (`FALSE` if data is
|
||||
#' not 'empty').
|
||||
#'
|
||||
#' Needed for proper data validation.
|
||||
#' (ДУБЛИРУЕТ МОДУЛЬ `data_manipulation`)
|
||||
check_for_empty_data <- function(value_to_check) {
|
||||
|
||||
# for any 0-length
|
||||
if (length(value_to_check) == 0) return(TRUE)
|
||||
|
||||
# for NA
|
||||
if (is.logical(value_to_check) && is.na(value_to_check)) return(TRUE)
|
||||
|
||||
# for NULL
|
||||
if (is.null(value_to_check)) return(TRUE)
|
||||
|
||||
# for non-empty Date (RETURN FALSE)
|
||||
if (inherits(value_to_check, "Date") && length(value_to_check) != 0) return(FALSE)
|
||||
|
||||
# for empty strings (stands before checking non-empty data for avoid mistakes)
|
||||
if (value_to_check == "") return(TRUE)
|
||||
|
||||
FALSE
|
||||
}
|
||||
@@ -4,7 +4,8 @@
|
||||
#' not 'empty').
|
||||
#'
|
||||
#' Needed for proper data validation.
|
||||
check_for_empty_data = function(value_to_check) {
|
||||
#' @export
|
||||
is_this_empty_value = function(value_to_check) {
|
||||
|
||||
# for any 0-length
|
||||
if (length(value_to_check) == 0) return(TRUE)
|
||||
@@ -19,7 +20,14 @@ check_for_empty_data = function(value_to_check) {
|
||||
if (inherits(value_to_check, "Date") && length(value_to_check) != 0) return(FALSE)
|
||||
|
||||
# for empty strings (stands before checking non-empty data for avoid mistakes)
|
||||
if (value_to_check == "") return(TRUE)
|
||||
if (is.character(value_to_check)) {
|
||||
if (is.na(value_to_check)) return(TRUE)
|
||||
if (value_to_check == "") return(TRUE)
|
||||
}
|
||||
|
||||
FALSE
|
||||
if (is.double(value_to_check)) {
|
||||
if (is.na(value_to_check)) return(TRUE)
|
||||
}
|
||||
|
||||
return(FALSE)
|
||||
}
|
||||
|
||||
@@ -3,7 +3,7 @@
|
||||
init_val = function(scheme, ns) {
|
||||
|
||||
options(box.path = here::here())
|
||||
box::use(modules/data_manipulations[check_for_empty_data])
|
||||
box::use(modules/data_manipulations[is_this_empty_value])
|
||||
|
||||
iv <- shinyvalidate::InputValidator$new()
|
||||
|
||||
@@ -15,7 +15,7 @@ init_val = function(scheme, ns) {
|
||||
|
||||
# формируем список id - тип
|
||||
inputs_simple_list <- scheme |>
|
||||
dplyr::filter(!form_type %in% c("nested_forms","description", "description_header")) |>
|
||||
dplyr::filter(!form_type %in% c("nested_forms", "description", "description_header")) |>
|
||||
dplyr::distinct(form_id, form_type) |>
|
||||
tibble::deframe()
|
||||
|
||||
@@ -39,7 +39,7 @@ init_val = function(scheme, ns) {
|
||||
|
||||
iv$add_rule(x_input_id, function(x) {
|
||||
# exit if empty
|
||||
if (check_for_empty_data(x)) {
|
||||
if (is_this_empty_value(x)) {
|
||||
return(NULL)
|
||||
}
|
||||
# хак для пропуска значений
|
||||
@@ -64,7 +64,7 @@ init_val = function(scheme, ns) {
|
||||
function(x) {
|
||||
|
||||
# exit if empty
|
||||
if (check_for_empty_data(x)) {
|
||||
if (is_this_empty_value(x)) {
|
||||
return(NULL)
|
||||
}
|
||||
|
||||
@@ -85,11 +85,11 @@ init_val = function(scheme, ns) {
|
||||
}
|
||||
}
|
||||
|
||||
if (form_type %in% c("select_multiple", "select_one")) {
|
||||
if (form_type %in% c("select_multiple", "select_one", "radio", "checkbox")) {
|
||||
iv$add_rule(x_input_id, function(x) {
|
||||
|
||||
if (length(x) == 1) {
|
||||
if (check_for_empty_data(x)) return(NULL)
|
||||
if (is_this_empty_value(x)) return(NULL)
|
||||
}
|
||||
|
||||
# проверка на соответствие вариантов схеме ---------
|
||||
|
||||
@@ -39,7 +39,7 @@ check_if_table_is_exist_and_init_if_not = function(
|
||||
|
||||
if (table_name %in% DBI::dbListTables(con)) {
|
||||
|
||||
cli::cli_inform(c("*" = "таблица есть такая: '{table_name}'"))
|
||||
cli::cli_inform(c("*" = "проверка таблицы в базе данных: '{table_name}'"))
|
||||
|
||||
# если таблица существует, производим проверку структуры таблицы
|
||||
compare_existing_table_with_schema(
|
||||
@@ -185,12 +185,13 @@ write_df_to_db = function(
|
||||
con
|
||||
) {
|
||||
|
||||
scheme <- schm$get_schema(table_name)
|
||||
scheme <- schm$get_scheme(table_name)
|
||||
main_key_id <- schm$get_main_key_id
|
||||
nested_key_id <- schm$get_key_id(table_name)
|
||||
|
||||
date_columns <- subset(scheme, form_type == "date", form_id, drop = TRUE)
|
||||
number_columns <- subset(scheme, form_type == "number", form_id, drop = TRUE)
|
||||
other_cols <- which(colnames(df) %in% c(date_columns, number_columns))
|
||||
|
||||
df <- df |>
|
||||
dplyr::mutate(
|
||||
@@ -198,8 +199,12 @@ write_df_to_db = function(
|
||||
dplyr::across(tidyselect::all_of({{date_columns}}), \(x) purrr::map_chr(x, excel_to_db_dates_converter)),
|
||||
# числа - к единому формату десятичных значений
|
||||
dplyr::across(tidyselect::all_of({{number_columns}}), ~ gsub("\\.", "," , .x)),
|
||||
dplyr::across(tidyselect::all_of({{other_cols}}), as.character),
|
||||
)
|
||||
|
||||
df |>
|
||||
dplyr::glimpse()
|
||||
|
||||
if (table_name == "main") {
|
||||
del_query <- glue::glue("DELETE FROM main WHERE {main_key_id} = '{main_key_value}'")
|
||||
}
|
||||
|
||||
@@ -5,7 +5,7 @@ set_global_options = function(
|
||||
APP.DEBUG = FALSE,
|
||||
# APP.FILE_DB = fs::path("data.sqlite"),
|
||||
shiny.host = "127.0.0.1",
|
||||
shiny.port = 1337,
|
||||
shiny.port = 1338,
|
||||
...
|
||||
) {
|
||||
options(
|
||||
@@ -29,6 +29,11 @@ check_and_init_scheme = function() {
|
||||
|
||||
cli::cli_inform(c("*" = "проверка схемы..."))
|
||||
|
||||
files_to_watch <- c(
|
||||
"modules/scheme_generator.R",
|
||||
"modules/utils.R"
|
||||
)
|
||||
|
||||
scheme_names <- enabled_schemas
|
||||
scheme_file <- paste0("configs/schemas/", scheme_names, ".xlsx")
|
||||
scheme_file <- stats::setNames(scheme_file, scheme_names)
|
||||
@@ -40,7 +45,7 @@ check_and_init_scheme = function() {
|
||||
hash_file <- "temp/schema_hash.rds"
|
||||
|
||||
#
|
||||
exist_hash <- tools::md5sum(scheme_file)
|
||||
exist_hash <- tools::md5sum(c(scheme_file, files_to_watch))
|
||||
|
||||
# если первый запуск (нет файла с кешем) инициализация схемы
|
||||
if (!file.exists(hash_file) | !file.exists("scheme.rds") | !all(file.exists(db_files))) {
|
||||
@@ -55,8 +60,9 @@ check_and_init_scheme = function() {
|
||||
# если данные были изменены проводим реинициализацию таблицы и схемы
|
||||
if (!all(exist_hash == saved_hash)) {
|
||||
|
||||
cli::cli_inform(c(">" = "Данные схемы были изменены..."))
|
||||
cli::cli_inform(c(">" = "Данные схем были изменены..."))
|
||||
init_scheme(scheme_file)
|
||||
|
||||
} else {
|
||||
cli::cli_alert_success("изменений нет")
|
||||
}
|
||||
|
||||
@@ -1,14 +1,14 @@
|
||||
|
||||
#' @export
|
||||
scheme_R6 <- R6::R6Class(
|
||||
"schemes_f",
|
||||
"schemes_generator",
|
||||
public = list(
|
||||
|
||||
initialize = function(scheme_file_path = NULL) {
|
||||
|
||||
private$scheme_file_path <- scheme_file_path
|
||||
|
||||
# make list of schemas
|
||||
# make list of schemes
|
||||
private$schemes_list <- list()
|
||||
private$schemes_list[["main"]] <- private$load_scheme_from_xlsx("main")
|
||||
|
||||
@@ -18,6 +18,10 @@ scheme_R6 <- R6::R6Class(
|
||||
dplyr::distinct(form_id) |>
|
||||
dplyr::pull(form_id)
|
||||
|
||||
# проверка на не пересечение с зарезервированными именами
|
||||
check <- private$reserved_table_names %in% private$nested_forms_names
|
||||
if (any(check)) cli::cli_abort(c("нельзя использовать данные имена вложенных таблиц:", paste("- ", private$reserved_table_names[check])))
|
||||
|
||||
purrr::walk(
|
||||
.x = purrr::set_names(private$nested_forms_names),
|
||||
.f = \(nested_form_id) {
|
||||
@@ -36,7 +40,7 @@ scheme_R6 <- R6::R6Class(
|
||||
private$main_key_id <- self$get_key_id("main")
|
||||
|
||||
box::use(modules/utils)
|
||||
private$testest <- bslib::navset_card_underline(
|
||||
private$bslib_rendered_ui <- bslib::navset_card_underline(
|
||||
id = "main",
|
||||
!!!utils$make_list_of_pages(private$schemes_list[["main"]], private$main_key_id),
|
||||
header = NULL,
|
||||
@@ -47,7 +51,7 @@ scheme_R6 <- R6::R6Class(
|
||||
get_all_ids = function(table_name) {
|
||||
|
||||
private$schemes_list[[table_name]] |>
|
||||
dplyr::filter(!form_type %in% private$exluded_types) |>
|
||||
dplyr::filter(!form_type %in% private$excluded_types) |>
|
||||
dplyr::distinct(form_id) |>
|
||||
dplyr::pull(form_id)
|
||||
|
||||
@@ -65,32 +69,24 @@ scheme_R6 <- R6::R6Class(
|
||||
|
||||
},
|
||||
|
||||
extract_forms_id_and_types_from_scheme2 = function(scheme) {
|
||||
|
||||
form_id_and_types_list <- scheme |>
|
||||
dplyr::filter(!form_type %in% private$exluded_types) |>
|
||||
dplyr::distinct(form_id, form_type) |>
|
||||
tibble::deframe()
|
||||
|
||||
list(
|
||||
key = form_id_and_types_list[1],
|
||||
form = form_id_and_types_list[-1]
|
||||
)
|
||||
},
|
||||
|
||||
# get_key_id = function(table_name) {
|
||||
# self$extract_forms_id_and_types_from_scheme2(private$schemes_list[[table_name]])
|
||||
# },
|
||||
get_schema = function(table_name) {
|
||||
# возврат схемы ------------------------------------
|
||||
## полностью -------
|
||||
get_scheme = function(table_name) {
|
||||
private$schemes_list[[table_name]]
|
||||
},
|
||||
## с полями имеющие значение -------
|
||||
get_scheme_with_values_forms = function(table_name) {
|
||||
private$schemes_list[[table_name]] |>
|
||||
dplyr::filter(!form_type %in% private$excluded_types)
|
||||
},
|
||||
|
||||
get_id_type_list = function(table_name) {
|
||||
|
||||
# wo main key
|
||||
this_key_id <- self$get_key_id(table_name)
|
||||
|
||||
private$schemes_list[[table_name]] |>
|
||||
dplyr::filter(!form_type %in% private$exluded_types) |>
|
||||
dplyr::filter(!form_type %in% private$excluded_types) |>
|
||||
dplyr::filter(form_id != {{this_key_id}}) |>
|
||||
dplyr::distinct(form_id, form_type) |>
|
||||
tibble::deframe()
|
||||
@@ -107,7 +103,7 @@ scheme_R6 <- R6::R6Class(
|
||||
private$nested_forms_names
|
||||
},
|
||||
get_main_form_ui = function() {
|
||||
private$testest
|
||||
private$bslib_rendered_ui
|
||||
}
|
||||
),
|
||||
private = list(
|
||||
@@ -115,8 +111,9 @@ scheme_R6 <- R6::R6Class(
|
||||
schemes_list = NULL,
|
||||
main_key_id = NA,
|
||||
nested_forms_names = NA,
|
||||
testest = NA,
|
||||
exluded_types = c("inline_table", "nested_forms","description", "description_header"),
|
||||
bslib_rendered_ui = NA,
|
||||
excluded_types = c("nested_forms", "description", "description_header"),
|
||||
reserved_table_names = c("meta", "log", "main"),
|
||||
|
||||
load_scheme_from_xlsx = function(sheet_name) {
|
||||
|
||||
@@ -140,8 +137,15 @@ scheme_R6 <- R6::R6Class(
|
||||
dplyr::pull(form_id)
|
||||
|
||||
if (length(duplicate_ids) > 0) {
|
||||
cli::cli_abort(c("В схеме для формы '{sheet_name}' содержатся повторяющиеся id:", paste("-", duplicate_ids)))
|
||||
cli::cli_abort(c("В схеме '{private$scheme_file_path}' для формы '{sheet_name}' содержатся повторяющиеся id:", paste("-", duplicate_ids)))
|
||||
}
|
||||
|
||||
# проверка на корректные id
|
||||
input_names_with_dash <- unique(table$form_id)[grepl("-", unique(table$form_id))]
|
||||
if (length(input_names_with_dash) > 0) {
|
||||
cli::cli_abort(c("В схеме '{private$scheme_file_path}' в id форм содержатся `-`, может привести к некорректной последующей работой с базой данных", paste("-", input_names_with_dash)))
|
||||
}
|
||||
|
||||
table
|
||||
}
|
||||
)
|
||||
@@ -152,7 +156,7 @@ scheme_R6 <- R6::R6Class(
|
||||
# schm$get_forms_ids("main")
|
||||
# schm$get_all_ids("main")
|
||||
|
||||
# schm$get_schema("main")
|
||||
# schm$get_scheme("main")
|
||||
|
||||
# schm$get_id_type_list("allergo_anamnesis")
|
||||
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
#' @export
|
||||
make_list_of_pages = function(main_schema, main_key_id) {
|
||||
cli::cli_alert_success("AAAA")
|
||||
|
||||
purrr::map(
|
||||
.x = unique(main_schema$part),
|
||||
.f = \(page_name) {
|
||||
@@ -264,6 +264,15 @@ update_forms_with_data = function(
|
||||
ns
|
||||
) {
|
||||
|
||||
options(box.path = here::here())
|
||||
box::use(modules/data_manipulations[is_this_empty_value])
|
||||
|
||||
# print("-----------------")
|
||||
# cli::cli_inform("form_id: {form_id} | form_type: {form_type}")
|
||||
# print(value)
|
||||
# print(typeof(value))
|
||||
# print(is_this_empty_value(value))
|
||||
|
||||
filterd_line <- scheme |>
|
||||
dplyr::filter(form_id == {{form_id}})
|
||||
|
||||
@@ -294,50 +303,58 @@ update_forms_with_data = function(
|
||||
new_choices <- unique(c(old_choices, value))
|
||||
new_choices <- new_choices[!is.na(new_choices)]
|
||||
|
||||
|
||||
shiny::updateSelectizeInput(inputId = form_id, selected = value, choices = new_choices)
|
||||
# shiny::updateSelectizeInput(inputId = form_id, selected = value)
|
||||
}
|
||||
|
||||
# select_multiple
|
||||
# check if value is not NA and split by delimetr
|
||||
if (form_type == "select_multiple" && !is.na(value)) {
|
||||
vars <- stringr::str_split_1(value, local_delimeter)
|
||||
if (form_type == "select_multiple") {
|
||||
if (is_this_empty_value(value)) {
|
||||
shiny::updateSelectizeInput(inputId = form_id, selected = as.character(0))
|
||||
} else {
|
||||
vars <- stringr::str_split_1(value, local_delimeter)
|
||||
|
||||
# update choices
|
||||
old_choices <- filterd_line$choices
|
||||
new_choices <- unique(c(old_choices, vars))
|
||||
new_choices <- new_choices[!is.na(new_choices)]
|
||||
|
||||
shiny::updateSelectizeInput(inputId = form_id, selected = vars, choices = new_choices)
|
||||
# shiny::updateSelectizeInput(inputId = form_id, selected = vars)
|
||||
}
|
||||
|
||||
# in other case fill with `character(0)` to proper reseting form
|
||||
if (form_type == "select_multiple" && is.na(value)) {
|
||||
shiny::updateSelectizeInput(inputId = form_id, selected = character(0))
|
||||
# update choices
|
||||
old_choices <- filterd_line$choices
|
||||
new_choices <- unique(c(old_choices, vars))
|
||||
new_choices <- new_choices[!is.na(new_choices)]
|
||||
shiny::updateSelectizeInput(inputId = form_id, selected = vars, choices = new_choices)
|
||||
}
|
||||
}
|
||||
|
||||
# radio buttons
|
||||
if (form_type == "radio" && !is.na(value)) {
|
||||
shiny::updateRadioButtons(inputId = form_id, selected = value)
|
||||
}
|
||||
if (form_type == "radio" && is.na(value)) {
|
||||
shiny::updateRadioButtons(inputId = form_id, selected = character(0))
|
||||
if (form_type == "radio") {
|
||||
if (is_this_empty_value(value)) {
|
||||
shiny::updateRadioButtons(inputId = form_id, selected = character(0))
|
||||
} else {
|
||||
# update choices
|
||||
old_choices <- filterd_line$choices
|
||||
new_choices <- unique(c(old_choices, value))
|
||||
new_choices <- new_choices[!is.na(new_choices)]
|
||||
|
||||
shiny::updateRadioButtons(inputId = form_id, selected = value, choices = new_choices)
|
||||
}
|
||||
}
|
||||
|
||||
# checkboxes
|
||||
if (form_type == "checkbox" && !is.na(value)) {
|
||||
vars <- stringr::str_split_1(value, local_delimeter)
|
||||
shiny::updateCheckboxGroupInput(inputId = form_id, selected = vars)
|
||||
}
|
||||
if (form_type == "checkbox" && is.na(value)) {
|
||||
shiny::updateCheckboxGroupInput(inputId = form_id, selected = character(0))
|
||||
if (form_type == "checkbox") {
|
||||
|
||||
if (is_this_empty_value(value)) {
|
||||
shiny::updateCheckboxGroupInput(inputId = form_id, selected = character(0))
|
||||
} else {
|
||||
|
||||
vars <- stringr::str_split_1(value, local_delimeter)
|
||||
|
||||
# update choices
|
||||
old_choices <- filterd_line$choices
|
||||
new_choices <- unique(c(old_choices, vars))
|
||||
new_choices <- new_choices[!is.na(new_choices)]
|
||||
|
||||
shiny::updateCheckboxGroupInput(inputId = form_id, selected = vars, choices = new_choices)
|
||||
}
|
||||
|
||||
}
|
||||
|
||||
# if (type == "inline_table") {
|
||||
# message("EMPTY")
|
||||
# }
|
||||
}
|
||||
|
||||
#' @export
|
||||
@@ -361,7 +378,7 @@ clean_forms = function(
|
||||
form_id = x_id,
|
||||
form_type = x_type,
|
||||
value = get_empty_data(x_type),
|
||||
scheme = schm$get_schema(table_name),
|
||||
scheme = schm$get_scheme(table_name),
|
||||
ns = ns
|
||||
)
|
||||
}
|
||||
|
||||
@@ -3,7 +3,7 @@
|
||||
# SETUP AUTH =============================
|
||||
# Init DB using credentials data
|
||||
credentials <- data.frame(
|
||||
user = c("admin", "user"),
|
||||
user = c("admin", "user"),
|
||||
password = c("admin", "user"),
|
||||
# password will automatically be hashed
|
||||
admin = c(TRUE, FALSE),
|
||||
|
||||
Reference in New Issue
Block a user