feat: bring config file back

This commit is contained in:
2026-04-20 18:50:40 +03:00
parent 7a006f6d6b
commit ac75ab08c2
8 changed files with 84 additions and 35 deletions

View File

@@ -4,9 +4,8 @@ source("renv/activate.R")
(function() {
paths <- c(
"FORM_AUTH_ENABLED",
"FORM_VERSION",
"FORM_TITLE"
"R_CONFIG_ACTIVE",
"AUTH_DB_KEY"
)
lines <- paths[Sys.getenv(paths) == ""]

1
.gitignore vendored
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@@ -4,6 +4,7 @@
scheme.rds
configs/schemas/d2tra_t.xlsx
configs/schemas/antifib.xlsx
/_devel
.Renviron
.DS_Store
.lintr

41
app.R
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@@ -9,12 +9,9 @@ suppressPackageStartupMessages({
library(shinymanager)
})
# КАК ЗАПРЯТЯАТЬ ID
# SOURCE FILES ============================
box::purge_cache()
box::use(
configs/enabled_schemes[enabled_schemes],
modules/utils,
modules/global_options,
modules/db,
@@ -22,17 +19,25 @@ box::use(
modules/scheme_generator[scheme_R6]
)
# SETTINGS ================================
FILE_SCHEME <- fs::path("configs/schemas", "schema.xlsx")
AUTH_ENABLED <- Sys.getenv("FORM_AUTH_ENABLED", FALSE)
HEADER_TEXT <- sprintf("%s (%s)", Sys.getenv("FORM_TITLE", "NA"), Sys.getenv("FORM_VERSION", "NA"))
global_options$set_global_options(
shiny.host = "0.0.0.0"
# enabled_schemes = "example_of_scheme"
)
global_options$check_and_init_scheme()
# global vars
box::use(
modules/global_options[AUTH_ENABLED]
)
# SETTINGS ================================
HEADER_TEXT <- sprintf("%s (%s)", config::get("form_name"), config::get("form_app_version"))
# sadasdasdasdasdas
options(box.path = config::get("form_configs_path"))
box::use(enabled/enabled_schemes[enabled_schemes])
# CHECK FOR PANDOC
# TEMP ! NEED TO HANDLE
rmarkdown::find_pandoc(dir = "/opt/homebrew/bin/")
@@ -45,7 +50,14 @@ schms <- readRDS("scheme.rds")
# UI =======================
ui <- page_sidebar(
title = HEADER_TEXT,
# title = HEADER_TEXT,
title = tagList(
h4(HEADER_TEXT, style = "margin-top: .5rem"),
tooltip(
span("about", icon("circle-info", lib = "font-awesome")),
"Данный функционал позволяет обрабатывать информацию о пациентах на комиссию, используя Excel (обновление данных возможно через окно формирования списка пациентов)"
)
),
theme = bs_theme(version = 5, preset = "bootstrap"),
sidebar = sidebar(
actionButton("add_new_main_key_button", "Добавить новую запись", icon("plus", lib = "font-awesome")),
@@ -59,12 +71,9 @@ ui <- page_sidebar(
position = "left",
open = list(mobile = "always")
),
as_fill_carrier(uiOutput("main_ui_navset"))
as_fill_carrier(uiOutput("main_ui_navset")),
)
# MODALS ========================
# окно для подвтерждения очищения данных
# init auth =======================
if (AUTH_ENABLED) {
# shinymanager::set_labels("en", "Please authenticate" = "scheme()")
@@ -898,6 +907,8 @@ server <- function(input, output, session) {
"Пользователь" , ifelse(AUTH_ENABLED, res_auth$user, "anonymous"),
"Название базы" , names(enabled_schemes)[enabled_schemes == scheme()],
"id базы" , scheme(),
"id формы" , config::get("form_id"),
"ver формы" , config::get("form_app_version"),
"Время выгрузки" , format(Sys.time(), "%d.%m.%Y %H:%M:%S"),
)
@@ -1196,6 +1207,8 @@ server <- function(input, output, session) {
action_row <- tibble(
date = Sys.time(),
user = ifelse(AUTH_ENABLED, res_auth$user, "anonymous"),
app_id = config::get("form_id"),
app_ver = config::get("form_app_version"),
remote_addr = session$request$REMOTE_ADDR,
key = key,
action = action,

17
config.yml Normal file
View File

@@ -0,0 +1,17 @@
default:
form_app_version: 0.15.0
prod:
form_db_path: db
form_configs_path: configs
form_auth_enabled: true
form_id: new_form
form_name: NEW FORMY
devel:
form_db_path: _devel/db
form_configs_path: _devel/configs
form_auth_enabled: false
form_id: new_form
form_name: NEW FORMY
form_app_version: 0.15.0 dev

View File

@@ -1,5 +1,4 @@
#' @export
enabled_schemes <- c(
`Тестовая база данных` = "example_of_scheme"
# `D2TRA (для отладки)` = "d2tra_t"
)

View File

@@ -70,10 +70,7 @@ init_val = function(scheme, ns) {
val_is_a_number = function(x) {
# exit if empty
if (is_this_empty_value(x)) {
return(NULL)
}
if (is_this_empty_value(x)) return(NULL)
# хак для пропуска значений
if (x == "NA") return(NULL)
@@ -87,10 +84,7 @@ val_is_a_number = function(x) {
val_number_within_a_range = function(x, ranges) {
# exit if empty
if (is_this_empty_value(x)) {
return(NULL)
}
if (is_this_empty_value(x)) return(NULL)
if (x == "NA") return(NULL)
# замена разделителя десятичных цифр

View File

@@ -4,7 +4,11 @@
#' @param where text mark to distingiush calss
make_db_connection = function(scheme, where = "") {
if (getOption("APP.DEBUG", FALSE)) message("=== DB CONNECT ", where)
DBI::dbConnect(RSQLite::SQLite(), fs::path("db", scheme, ext = "sqlite"))
DBI::dbConnect(RSQLite::SQLite(), fs::path(
config::get("form_db_path"),
scheme,
ext = "sqlite"
))
}
#' @export
@@ -12,12 +16,14 @@ make_db_connection = function(scheme, where = "") {
#' Function to close connection to db, disigned to easy dubugging and
#' hide warnings.
close_db_connection = function(con, where = "") {
tryCatch(
expr = DBI::dbDisconnect(con),
error = function(e) print(e),
warning = function(w) if (getOption("APP.DEBUG", FALSE)) message("=!= ALREADY DISCONNECTED ", where),
finally = if (getOption("APP.DEBUG", FALSE)) message("=/= DB DISCONNECT ", where)
)
}
#' @export

View File

@@ -3,13 +3,28 @@
set_global_options = function(
SYMBOL_DELIM = "; ",
APP.DEBUG = FALSE,
# APP.FILE_DB = fs::path("data.sqlite"),
shiny.host = "127.0.0.1",
shiny.port = 1338,
...
) {
config_params_to_check <- c(
"form_app_version",
"form_db_path",
"form_configs_path",
"form_auth_enabled",
"form_id",
"form_name"
)
expected_params_in_config <- config_params_to_check %in% names(config::get())
if (!all(expected_params_in_config)) {
cli::cli_abort(c("ну так не пойдет:", paste("-", config_params_to_check[!expected_params_in_config])))
}
options(
SYMBOL_DELIM = SYMBOL_DELIM,
# form.db_path = config::get("form_db_path"),
APP.DEBUG = APP.DEBUG,
# APP.FILE_DB = APP.FILE_DB,
shiny.host = shiny.host,
@@ -18,27 +33,30 @@ set_global_options = function(
)
}
#' @export
AUTH_ENABLED <- Sys.getenv("FORM_AUTH_ENABLED", FALSE)
#' @export
check_and_init_scheme = function() {
cli::cli_inform(c("*" = "проверка схемы..."))
options(box.path = here::here())
box::use(configs/enabled_schemes[enabled_schemes])
options(box.path = config::get("form_configs_path"))
box::use(enabled/enabled_schemes[enabled_schemes])
files_to_watch <- c(
"configs/enabled_schemes.R",
fs::path(config::get("form_configs_path"), "enabled", "enabled_schemes.R"),
"modules/scheme_generator.R",
"modules/utils.R"
)
scheme_names <- enabled_schemes
scheme_file <- paste0("configs/schemas/", scheme_names, ".xlsx")
scheme_file <- paste0(config::get("form_configs_path"), "/schemas/", scheme_names, ".xlsx")
scheme_file <- stats::setNames(scheme_file, scheme_names)
if (!all(file.exists(scheme_file))) cli::cli_abort(c("Отсутствуют файлы схем для следующих наименований:", paste("-", names(scheme_file)[!file.exists(scheme_file)])))
db_files <- paste0("db/", scheme_names, ".sqlite")
db_files <- paste0(config::get("form_db_path"), "/", scheme_names, ".sqlite")
hash_file <- "temp/schema_hash.rds"
@@ -54,6 +72,8 @@ check_and_init_scheme = function() {
} else {
saved_hash <- readRDS(hash_file)
print(exist_hash)
print(saved_hash)
# если данные были изменены проводим реинициализацию таблицы и схемы
if (!all(exist_hash == saved_hash)) {
@@ -79,7 +99,7 @@ init_scheme = function(scheme_file) {
modules/scheme_generator[scheme_R6]
)
if (!dir.exists("db")) dir.create("db")
if (!dir.exists(config::get("form_db_path"))) dir.create(config::get("form_db_path"))
cli::cli_h1("Инициализация схемы")
schms <- purrr::map2(